Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Gm23547-201ENSMUST00000158210 271 ntBASIC12.37□□□□□ -0.43
Npas1P97459 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.37□□□□□ -0.43
Npas1P97459 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC12.37□□□□□ -0.43
Npas1P97459 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Npas1P97459 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.37□□□□□ -0.43
Npas1P97459 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.37□□□□□ -0.43
Npas1P97459 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Npas1P97459 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Npas1P97459 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Npas1P97459 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.36□□□□□ -0.43
Npas1P97459 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Gm10013-201ENSMUST00000106074 672 ntBASIC12.36□□□□□ -0.43
Npas1P97459 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.36□□□□□ -0.43
Npas1P97459 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Npas1P97459 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.36□□□□□ -0.43
Npas1P97459 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Npas1P97459 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.36□□□□□ -0.43
Npas1P97459 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.36□□□□□ -0.43
Npas1P97459 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Npas1P97459 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Npas1P97459 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Npas1P97459 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.36□□□□□ -0.43
Npas1P97459 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Npas1P97459 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Npas1P97459 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Npas1P97459 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Npas1P97459 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.35□□□□□ -0.43
Npas1P97459 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Npas1P97459 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Npas1P97459 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Npas1P97459 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms