Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Trim43bP86448 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.16■□□□□ 0.02
Trim43bP86448 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43bP86448 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.16■□□□□ 0.02
Trim43bP86448 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trim43bP86448 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trim43bP86448 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim43bP86448 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim43bP86448 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim43bP86448 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.15■□□□□ 0.02
Trim43bP86448 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.15■□□□□ 0.02
Trim43bP86448 Gm5364-201ENSMUST00000216789 889 ntBASIC15.15■□□□□ 0.02
Trim43bP86448 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim43bP86448 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim43bP86448 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Trim43bP86448 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim43bP86448 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.15■□□□□ 0.02
Trim43bP86448 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Trim43bP86448 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim43bP86448 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim43bP86448 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim43bP86448 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Celf4-206ENSMUST00000224553 1729 ntBASIC15.14■□□□□ 0.01
Trim43bP86448 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim43bP86448 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim43bP86448 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim43bP86448 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim43bP86448 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim43bP86448 Gm27646-201ENSMUST00000183989 110 ntBASIC15.14■□□□□ 0.01
Trim43bP86448 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.14■□□□□ 0.01
Trim43bP86448 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Trim43bP86448 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Trim43bP86448 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim43bP86448 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim43bP86448 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim43bP86448 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim43bP86448 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Trim43bP86448 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim43bP86448 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Trim43bP86448 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim43bP86448 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Trim43bP86448 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.13■□□□□ 0.01
Trim43bP86448 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim43bP86448 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim43bP86448 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trim43bP86448 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trim43bP86448 Gm8000-201ENSMUST00000188378 592 ntBASIC15.13■□□□□ 0.01
Trim43bP86448 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.13■□□□□ 0.01
Trim43bP86448 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms