Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Rpl39P62892 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Gm44454-201ENSMUST00000198541 138 ntBASIC10.52□□□□□ -0.73
Rpl39P62892 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC10.52□□□□□ -0.73
Rpl39P62892 AC122024.2-201ENSMUST00000220086 871 ntBASIC10.52□□□□□ -0.73
Rpl39P62892 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rpl39P62892 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.52□□□□□ -0.73
Rpl39P62892 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Rpl39P62892 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Rpl39P62892 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Rpl39P62892 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rpl39P62892 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Gm37019-201ENSMUST00000192133 2134 ntBASIC10.51□□□□□ -0.73
Rpl39P62892 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Rpl39P62892 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Rpl39P62892 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Rpl39P62892 Gm6433-201ENSMUST00000118634 875 ntBASIC10.51□□□□□ -0.73
Rpl39P62892 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Rprl3-201ENSMUST00000157400 290 ntBASIC10.51□□□□□ -0.73
Rpl39P62892 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC10.51□□□□□ -0.73
Rpl39P62892 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC10.51□□□□□ -0.73
Rpl39P62892 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.51□□□□□ -0.73
Rpl39P62892 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Rpl39P62892 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rpl39P62892 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC10.5□□□□□ -0.73
Rpl39P62892 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Rpl39P62892 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rpl39P62892 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Rpl39P62892 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rpl39P62892 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC10.5□□□□□ -0.73
Rpl39P62892 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC10.5□□□□□ -0.73
Rpl39P62892 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rpl39P62892 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Mxra8os-201ENSMUST00000097740 687 ntBASIC10.5□□□□□ -0.73
Rpl39P62892 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Rpl39P62892 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Rpl39P62892 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Rpl39P62892 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Rpl39P62892 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.49□□□□□ -0.73
Rpl39P62892 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms