Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Gm24158-201ENSMUST00000175263 71 ntBASIC17.49■□□□□ 0.39
Irf5P56477 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.49■□□□□ 0.39
Irf5P56477 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC17.49■□□□□ 0.39
Irf5P56477 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Irf5P56477 CT025555.1-201ENSMUST00000225901 1217 ntBASIC17.49■□□□□ 0.39
Irf5P56477 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Irf5P56477 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC17.49■□□□□ 0.39
Irf5P56477 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Irf5P56477 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC17.49■□□□□ 0.39
Irf5P56477 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Irf5P56477 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.48■□□□□ 0.39
Irf5P56477 AC167013.2-201ENSMUST00000228520 2684 ntBASIC17.48■□□□□ 0.39
Irf5P56477 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Irf5P56477 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.48■□□□□ 0.39
Irf5P56477 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.48■□□□□ 0.39
Irf5P56477 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.48■□□□□ 0.39
Irf5P56477 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC17.48■□□□□ 0.39
Irf5P56477 CT030684.1-201ENSMUST00000227292 914 ntBASIC17.48■□□□□ 0.39
Irf5P56477 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.48■□□□□ 0.39
Irf5P56477 Gm10154-201ENSMUST00000084445 354 ntBASIC17.48■□□□□ 0.39
Irf5P56477 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Irf5P56477 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Gm27528-202ENSMUST00000222916 2012 ntBASIC17.48■□□□□ 0.39
Irf5P56477 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Irf5P56477 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC17.47■□□□□ 0.39
Irf5P56477 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.47■□□□□ 0.39
Irf5P56477 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Irf5P56477 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.47■□□□□ 0.39
Irf5P56477 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 AC125206.2-201ENSMUST00000217454 574 ntBASIC17.47■□□□□ 0.39
Irf5P56477 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Irf5P56477 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Irf5P56477 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.47■□□□□ 0.39
Irf5P56477 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Irf5P56477 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Irf5P56477 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Irf5P56477 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Irf5P56477 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms