Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.56■□□□□ 0.56
Msh6P54276 Gm27631-201ENSMUST00000184163 466 ntBASIC18.56■□□□□ 0.56
Msh6P54276 Gm9908-201ENSMUST00000211534 448 ntBASIC18.56■□□□□ 0.56
Msh6P54276 Gm15823-201ENSMUST00000064305 670 ntBASIC18.56■□□□□ 0.56
Msh6P54276 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Msh6P54276 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Efs-202ENSMUST00000227037 2540 ntBASIC18.56■□□□□ 0.56
Msh6P54276 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC18.56■□□□□ 0.56
Msh6P54276 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Msh6P54276 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Msh6P54276 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Msh6P54276 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh6P54276 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.55■□□□□ 0.56
Msh6P54276 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Msh6P54276 Gm37748-201ENSMUST00000194379 1140 ntBASIC18.55■□□□□ 0.56
Msh6P54276 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.55■□□□□ 0.56
Msh6P54276 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Gm11478-201ENSMUST00000117851 599 ntBASIC18.55■□□□□ 0.56
Msh6P54276 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC18.55■□□□□ 0.56
Msh6P54276 Gm21854-201ENSMUST00000179901 471 ntBASIC18.55■□□□□ 0.56
Msh6P54276 Gm9522-201ENSMUST00000182394 926 ntBASIC18.55■□□□□ 0.56
Msh6P54276 Mir7085-201ENSMUST00000184353 66 ntBASIC18.55■□□□□ 0.56
Msh6P54276 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Msh6P54276 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Msh6P54276 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh6P54276 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Msh6P54276 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.54■□□□□ 0.56
Msh6P54276 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
Msh6P54276 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Msh6P54276 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC18.54■□□□□ 0.56
Msh6P54276 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Gm9115-201ENSMUST00000120192 1348 ntBASIC18.54■□□□□ 0.56
Msh6P54276 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC18.54■□□□□ 0.56
Msh6P54276 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Msh6P54276 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Msh6P54276 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Msh6P54276 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.54■□□□□ 0.56
Msh6P54276 Gm44719-201ENSMUST00000206404 149 ntBASIC18.54■□□□□ 0.56
Msh6P54276 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 AC149294.4-201ENSMUST00000227870 882 ntBASIC18.54■□□□□ 0.56
Msh6P54276 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Msh6P54276 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh6P54276 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Carlr-201ENSMUST00000181515 2574 ntBASIC18.53■□□□□ 0.56
Msh6P54276 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Msh6P54276 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Msh6P54276 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh6P54276 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms