Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Fdft1P53798 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Fdft1P53798 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.73□□□□□ -0.05
Fdft1P53798 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Gm27628-201ENSMUST00000184911 107 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Gm43767-201ENSMUST00000198933 381 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Gm2651-201ENSMUST00000203560 838 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.73□□□□□ -0.05
Fdft1P53798 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Mzt1-203ENSMUST00000227948 952 ntBASIC14.73□□□□□ -0.05
Fdft1P53798 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Fdft1P53798 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.73□□□□□ -0.05
Fdft1P53798 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Fdft1P53798 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Fdft1P53798 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Fdft1P53798 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Fdft1P53798 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.72□□□□□ -0.05
Fdft1P53798 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.72□□□□□ -0.05
Fdft1P53798 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.72□□□□□ -0.05
Fdft1P53798 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.72□□□□□ -0.05
Fdft1P53798 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Fdft1P53798 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Fdft1P53798 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.71□□□□□ -0.05
Fdft1P53798 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.71□□□□□ -0.05
Fdft1P53798 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Fdft1P53798 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
Fdft1P53798 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.71□□□□□ -0.05
Fdft1P53798 Gm12350-201ENSMUST00000121208 462 ntBASIC14.71□□□□□ -0.05
Fdft1P53798 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.71□□□□□ -0.05
Fdft1P53798 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.71□□□□□ -0.05
Fdft1P53798 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.71□□□□□ -0.05
Fdft1P53798 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Fdft1P53798 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Fdft1P53798 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Fdft1P53798 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Fdft1P53798 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fdft1P53798 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Fdft1P53798 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Fdft1P53798 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.71□□□□□ -0.06
Fdft1P53798 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.71□□□□□ -0.06
Fdft1P53798 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Fdft1P53798 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Fdft1P53798 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Fdft1P53798 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms