Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Brca1P48754 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Brca1P48754 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca1P48754 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca1P48754 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca1P48754 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca1P48754 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca1P48754 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Brca1P48754 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Gm26464-201ENSMUST00000157094 305 ntBASIC16.26■□□□□ 0.19
Brca1P48754 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Brca1P48754 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.26■□□□□ 0.19
Brca1P48754 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Brca1P48754 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.26■□□□□ 0.19
Brca1P48754 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.26■□□□□ 0.19
Brca1P48754 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.26■□□□□ 0.19
Brca1P48754 Gm15240-201ENSMUST00000118156 720 ntBASIC16.26■□□□□ 0.19
Brca1P48754 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.26■□□□□ 0.19
Brca1P48754 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.26■□□□□ 0.19
Brca1P48754 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.26■□□□□ 0.19
Brca1P48754 AC140451.2-201ENSMUST00000228030 664 ntBASIC16.26■□□□□ 0.19
Brca1P48754 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.26■□□□□ 0.19
Brca1P48754 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Brca1P48754 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Brca1P48754 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.25■□□□□ 0.19
Brca1P48754 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.25■□□□□ 0.19
Brca1P48754 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Gm18054-201ENSMUST00000207539 555 ntBASIC16.25■□□□□ 0.19
Brca1P48754 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Brca1P48754 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC16.25■□□□□ 0.19
Brca1P48754 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Brca1P48754 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Brca1P48754 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Ighv8-14-201ENSMUST00000196781 358 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Brca1P48754 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.24■□□□□ 0.19
Brca1P48754 Gm27514-201ENSMUST00000183692 110 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Gm18027-201ENSMUST00000218947 619 ntBASIC16.24■□□□□ 0.19
Brca1P48754 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Brca1P48754 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.24■□□□□ 0.19
Brca1P48754 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms