Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.17□□□□□ -0.14
Prox1P48437 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Prox1P48437 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Gm4459-201ENSMUST00000118750 468 ntBASIC14.17□□□□□ -0.14
Prox1P48437 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.17□□□□□ -0.14
Prox1P48437 Gm27867-201ENSMUST00000184778 125 ntBASIC14.17□□□□□ -0.14
Prox1P48437 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.17□□□□□ -0.14
Prox1P48437 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.17□□□□□ -0.14
Prox1P48437 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.17□□□□□ -0.14
Prox1P48437 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prox1P48437 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Prox1P48437 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.17□□□□□ -0.14
Prox1P48437 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.17□□□□□ -0.14
Prox1P48437 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prox1P48437 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.16□□□□□ -0.14
Prox1P48437 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Prox1P48437 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prox1P48437 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prox1P48437 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Prox1P48437 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Prox1P48437 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.15□□□□□ -0.14
Prox1P48437 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Prox1P48437 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Prox1P48437 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Prox1P48437 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.15□□□□□ -0.14
Prox1P48437 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.15□□□□□ -0.14
Prox1P48437 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.15□□□□□ -0.14
Prox1P48437 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Prox1P48437 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms