Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Mir8098-201ENSMUST00000184011 137 ntBASIC13.32□□□□□ -0.28
Rfx3P48381 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Gm9682-201ENSMUST00000197505 556 ntBASIC13.32□□□□□ -0.28
Rfx3P48381 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Celf4-206ENSMUST00000224553 1729 ntBASIC13.32□□□□□ -0.28
Rfx3P48381 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Rfx3P48381 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Rfx3P48381 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC13.31□□□□□ -0.28
Rfx3P48381 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Gm5682-201ENSMUST00000173402 505 ntBASIC13.31□□□□□ -0.28
Rfx3P48381 Gm6550-201ENSMUST00000187574 993 ntBASIC13.31□□□□□ -0.28
Rfx3P48381 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx3P48381 Gm5864-201ENSMUST00000202263 970 ntBASIC13.31□□□□□ -0.28
Rfx3P48381 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.31□□□□□ -0.28
Rfx3P48381 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Gm7461-201ENSMUST00000058918 827 ntBASIC13.31□□□□□ -0.28
Rfx3P48381 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx3P48381 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rfx3P48381 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx3P48381 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rfx3P48381 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.31□□□□□ -0.28
Rfx3P48381 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rfx3P48381 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Rfx3P48381 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Rfx3P48381 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rfx3P48381 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC13.3□□□□□ -0.28
Rfx3P48381 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Gm11764-201ENSMUST00000120221 623 ntBASIC13.3□□□□□ -0.28
Rfx3P48381 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.3□□□□□ -0.28
Rfx3P48381 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.3□□□□□ -0.28
Rfx3P48381 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rfx3P48381 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Rfx3P48381 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rfx3P48381 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rfx3P48381 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Rfx3P48381 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rfx3P48381 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Rfx3P48381 Gm12008-201ENSMUST00000117791 755 ntBASIC13.29□□□□□ -0.28
Rfx3P48381 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rfx3P48381 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms