Protein–RNA interactions for Protein: P47806

Gli1, Zinc finger protein GLI1, mousemouse

Predictions only

Length 1,111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli1P47806 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.41□□□□□ -0.1
Gli1P47806 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gli1P47806 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gli1P47806 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.41□□□□□ -0.1
Gli1P47806 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gli1P47806 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.4□□□□□ -0.1
Gli1P47806 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.4□□□□□ -0.1
Gli1P47806 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.4□□□□□ -0.1
Gli1P47806 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Gm26308-201ENSMUST00000157768 69 ntBASIC14.4□□□□□ -0.1
Gli1P47806 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.4□□□□□ -0.1
Gli1P47806 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.4□□□□□ -0.1
Gli1P47806 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Gli1P47806 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gli1P47806 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.4□□□□□ -0.1
Gli1P47806 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.4□□□□□ -0.11
Gli1P47806 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.39□□□□□ -0.11
Gli1P47806 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.39□□□□□ -0.11
Gli1P47806 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli1P47806 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gli1P47806 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gli1P47806 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Gli1P47806 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Gli1P47806 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gli1P47806 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.38□□□□□ -0.11
Gli1P47806 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Gli1P47806 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.38□□□□□ -0.11
Gli1P47806 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.38□□□□□ -0.11
Gli1P47806 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Gli1P47806 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gli1P47806 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.38□□□□□ -0.11
Gli1P47806 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.38□□□□□ -0.11
Gli1P47806 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli1P47806 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli1P47806 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms