Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sdc2P43407 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC16.54■□□□□ 0.24
Sdc2P43407 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Sdc2P43407 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Sdc2P43407 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.53■□□□□ 0.24
Sdc2P43407 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Mir8098-201ENSMUST00000184011 137 ntBASIC16.53■□□□□ 0.24
Sdc2P43407 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.53■□□□□ 0.24
Sdc2P43407 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Sdc2P43407 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.53■□□□□ 0.24
Sdc2P43407 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Sdc2P43407 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.53■□□□□ 0.24
Sdc2P43407 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.53■□□□□ 0.24
Sdc2P43407 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Sdc2P43407 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Sdc2P43407 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.53■□□□□ 0.24
Sdc2P43407 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.52■□□□□ 0.24
Sdc2P43407 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.52■□□□□ 0.24
Sdc2P43407 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sdc2P43407 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.52■□□□□ 0.24
Sdc2P43407 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Sdc2P43407 Gm6184-201ENSMUST00000120403 1261 ntBASIC16.52■□□□□ 0.24
Sdc2P43407 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Sdc2P43407 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Gm5864-201ENSMUST00000202263 970 ntBASIC16.52■□□□□ 0.24
Sdc2P43407 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Sdc2P43407 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.52■□□□□ 0.23
Sdc2P43407 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Sdc2P43407 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Sdc2P43407 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.51■□□□□ 0.23
Sdc2P43407 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sdc2P43407 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.51■□□□□ 0.23
Sdc2P43407 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.51■□□□□ 0.23
Sdc2P43407 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sdc2P43407 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sdc2P43407 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.51■□□□□ 0.23
Sdc2P43407 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sdc2P43407 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Sdc2P43407 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Sdc2P43407 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Sdc2P43407 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Sdc2P43407 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC16.5■□□□□ 0.23
Sdc2P43407 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC16.5■□□□□ 0.23
Sdc2P43407 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdc2P43407 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdc2P43407 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Sdc2P43407 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Sdc2P43407 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Sdc2P43407 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Sdc2P43407 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.5■□□□□ 0.23
Sdc2P43407 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.5■□□□□ 0.23
Sdc2P43407 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms