Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hist1h1aP43275 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.19□□□□□ -0.46
Hist1h1aP43275 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.18□□□□□ -0.46
Hist1h1aP43275 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.18□□□□□ -0.46
Hist1h1aP43275 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.18□□□□□ -0.46
Hist1h1aP43275 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hist1h1aP43275 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.16□□□□□ -0.46
Hist1h1aP43275 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.16□□□□□ -0.46
Hist1h1aP43275 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Hist1h1aP43275 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms