Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TfamP40630 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TfamP40630 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
TfamP40630 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
TfamP40630 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.27□□□□□ -0.13
TfamP40630 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.27□□□□□ -0.13
TfamP40630 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Gm5864-201ENSMUST00000202263 970 ntBASIC14.27□□□□□ -0.13
TfamP40630 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TfamP40630 Gm10060-201ENSMUST00000212002 111 ntBASIC14.27□□□□□ -0.13
TfamP40630 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.27□□□□□ -0.13
TfamP40630 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
TfamP40630 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.27□□□□□ -0.13
TfamP40630 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
TfamP40630 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TfamP40630 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TfamP40630 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TfamP40630 Gm9856-201ENSMUST00000217077 2578 ntBASIC14.27□□□□□ -0.13
TfamP40630 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.26□□□□□ -0.13
TfamP40630 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Mir8098-201ENSMUST00000184011 137 ntBASIC14.26□□□□□ -0.13
TfamP40630 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.26□□□□□ -0.13
TfamP40630 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TfamP40630 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TfamP40630 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
TfamP40630 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.25□□□□□ -0.13
TfamP40630 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TfamP40630 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TfamP40630 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.25□□□□□ -0.13
TfamP40630 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.25□□□□□ -0.13
TfamP40630 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.25□□□□□ -0.13
TfamP40630 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.25□□□□□ -0.13
TfamP40630 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
TfamP40630 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TfamP40630 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms