Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.67□□□□□ -0.06
LdlrP35951 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LdlrP35951 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.67□□□□□ -0.06
LdlrP35951 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.67□□□□□ -0.06
LdlrP35951 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.67□□□□□ -0.06
LdlrP35951 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.67□□□□□ -0.06
LdlrP35951 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.67□□□□□ -0.06
LdlrP35951 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.67□□□□□ -0.06
LdlrP35951 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm27628-201ENSMUST00000184911 107 ntBASIC14.67□□□□□ -0.06
LdlrP35951 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LdlrP35951 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.67□□□□□ -0.06
LdlrP35951 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.67□□□□□ -0.06
LdlrP35951 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LdlrP35951 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
LdlrP35951 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.66□□□□□ -0.06
LdlrP35951 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.66□□□□□ -0.06
LdlrP35951 Gm14822-201ENSMUST00000122247 291 ntBASIC14.66□□□□□ -0.06
LdlrP35951 Gm11780-201ENSMUST00000136880 516 ntBASIC14.66□□□□□ -0.06
LdlrP35951 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.66□□□□□ -0.06
LdlrP35951 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.66□□□□□ -0.06
LdlrP35951 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.66□□□□□ -0.06
LdlrP35951 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LdlrP35951 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LdlrP35951 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LdlrP35951 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
LdlrP35951 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Gm27646-201ENSMUST00000183989 110 ntBASIC14.65□□□□□ -0.06
LdlrP35951 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.65□□□□□ -0.06
LdlrP35951 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
LdlrP35951 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
LdlrP35951 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.64□□□□□ -0.07
LdlrP35951 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
LdlrP35951 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
LdlrP35951 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.64□□□□□ -0.07
LdlrP35951 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
LdlrP35951 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms