Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
Sox5P35710 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Sox5P35710 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Sox5P35710 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Sox5P35710 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.09■□□□□ 0.17
Sox5P35710 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC16.09■□□□□ 0.17
Sox5P35710 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Sox5P35710 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Sox5P35710 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.09■□□□□ 0.17
Sox5P35710 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.09■□□□□ 0.17
Sox5P35710 Gm45167-201ENSMUST00000208007 322 ntBASIC16.09■□□□□ 0.17
Sox5P35710 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Sox5P35710 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Birc2-201ENSMUST00000054878 378 ntBASIC16.09■□□□□ 0.17
Sox5P35710 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.09■□□□□ 0.17
Sox5P35710 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Sox5P35710 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
Sox5P35710 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.09■□□□□ 0.17
Sox5P35710 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox5P35710 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Sox5P35710 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox5P35710 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sox5P35710 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox5P35710 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Sox5P35710 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Sox5P35710 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.08■□□□□ 0.16
Sox5P35710 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.08■□□□□ 0.16
Sox5P35710 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.08■□□□□ 0.16
Sox5P35710 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.08■□□□□ 0.16
Sox5P35710 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sox5P35710 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Sox5P35710 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Sox5P35710 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 AC025913.2-201ENSMUST00000220136 1766 ntBASIC16.08■□□□□ 0.16
Sox5P35710 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Sox5P35710 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.07■□□□□ 0.16
Sox5P35710 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Sox5P35710 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Sox5P35710 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Sox5P35710 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Gm15593-201ENSMUST00000122085 1008 ntBASIC16.07■□□□□ 0.16
Sox5P35710 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.07■□□□□ 0.16
Sox5P35710 Gm27459-201ENSMUST00000184860 107 ntBASIC16.07■□□□□ 0.16
Sox5P35710 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.07■□□□□ 0.16
Sox5P35710 Gm43347-201ENSMUST00000200226 580 ntBASIC16.07■□□□□ 0.16
Sox5P35710 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.07■□□□□ 0.16
Sox5P35710 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.07■□□□□ 0.16
Sox5P35710 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.07■□□□□ 0.16
Sox5P35710 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Sox5P35710 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms