Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Hoxc5P32043 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.69□□□□□ -0.22
Hoxc5P32043 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.69□□□□□ -0.22
Hoxc5P32043 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Gm9856-201ENSMUST00000217077 2578 ntBASIC13.69□□□□□ -0.22
Hoxc5P32043 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc5P32043 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.69□□□□□ -0.22
Hoxc5P32043 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.68□□□□□ -0.22
Hoxc5P32043 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Gm18246-201ENSMUST00000221023 728 ntBASIC13.68□□□□□ -0.22
Hoxc5P32043 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.68□□□□□ -0.22
Hoxc5P32043 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc5P32043 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc5P32043 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc5P32043 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Hoxc5P32043 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.67□□□□□ -0.22
Hoxc5P32043 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.67□□□□□ -0.22
Hoxc5P32043 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.67□□□□□ -0.22
Hoxc5P32043 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
Hoxc5P32043 AV026068-213ENSMUST00000223675 1171 ntBASIC13.67□□□□□ -0.22
Hoxc5P32043 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm15590-201ENSMUST00000078419 552 ntBASIC13.67□□□□□ -0.22
Hoxc5P32043 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.67□□□□□ -0.22
Hoxc5P32043 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.67□□□□□ -0.22
Hoxc5P32043 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hoxc5P32043 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms