Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nedd8P29595 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nedd8P29595 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.63□□□□□ -0.23
Nedd8P29595 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.63□□□□□ -0.23
Nedd8P29595 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Nedd8P29595 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd8P29595 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nedd8P29595 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Gm12527-201ENSMUST00000117967 564 ntBASIC13.62□□□□□ -0.23
Nedd8P29595 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nedd8P29595 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Gm2274-201ENSMUST00000184539 609 ntBASIC13.62□□□□□ -0.23
Nedd8P29595 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.62□□□□□ -0.23
Nedd8P29595 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC13.62□□□□□ -0.23
Nedd8P29595 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nedd8P29595 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nedd8P29595 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nedd8P29595 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Nedd8P29595 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.62□□□□□ -0.23
Nedd8P29595 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.62□□□□□ -0.23
Nedd8P29595 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd8P29595 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nedd8P29595 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Nedd8P29595 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.61□□□□□ -0.23
Nedd8P29595 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nedd8P29595 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.61□□□□□ -0.23
Nedd8P29595 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC13.61□□□□□ -0.23
Nedd8P29595 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.61□□□□□ -0.23
Nedd8P29595 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.61□□□□□ -0.23
Nedd8P29595 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.61□□□□□ -0.23
Nedd8P29595 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nedd8P29595 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.61□□□□□ -0.23
Nedd8P29595 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Nedd8P29595 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nedd8P29595 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd8P29595 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Nedd8P29595 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Nedd8P29595 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Nedd8P29595 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nedd8P29595 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.6□□□□□ -0.23
Nedd8P29595 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms