Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nfkb1P25799 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Nfkb1P25799 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC15.14■□□□□ 0.01
Nfkb1P25799 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.14■□□□□ 0.01
Nfkb1P25799 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Nfkb1P25799 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Nfkb1P25799 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Nfkb1P25799 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Gm18049-201ENSMUST00000208909 581 ntBASIC15.13■□□□□ 0.01
Nfkb1P25799 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.13■□□□□ 0.01
Nfkb1P25799 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.13■□□□□ 0.01
Nfkb1P25799 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.13■□□□□ 0.01
Nfkb1P25799 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nfkb1P25799 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Gm8410-201ENSMUST00000117225 605 ntBASIC15.12■□□□□ 0.01
Nfkb1P25799 Gm13223-201ENSMUST00000118609 747 ntBASIC15.12■□□□□ 0.01
Nfkb1P25799 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.12■□□□□ 0.01
Nfkb1P25799 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.12■□□□□ 0.01
Nfkb1P25799 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.12■□□□□ 0.01
Nfkb1P25799 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.12■□□□□ 0.01
Nfkb1P25799 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.12■□□□□ 0.01
Nfkb1P25799 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nfkb1P25799 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nfkb1P25799 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nfkb1P25799 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC15.11■□□□□ 0.01
Nfkb1P25799 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.11■□□□□ 0.01
Nfkb1P25799 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms