Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Tnfrsf9P20334 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.08□□□□□ -0.47
Tnfrsf9P20334 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Tnfrsf9P20334 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Tnfrsf9P20334 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 AC123738.2-201ENSMUST00000223791 1899 ntBASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm8344-201ENSMUST00000119813 856 ntBASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm11424-201ENSMUST00000121929 829 ntBASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm5177-201ENSMUST00000183092 997 ntBASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Tnfrsf9P20334 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Gm12428-201ENSMUST00000119844 727 ntBASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Gm22175-201ENSMUST00000175007 78 ntBASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Mir6990-201ENSMUST00000183724 91 ntBASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Tnfrsf9P20334 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Tnfrsf9P20334 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms