Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Rb1P13405 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Rb1P13405 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Rb1P13405 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.1■□□□□ 0.01
Rb1P13405 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.1■□□□□ 0.01
Rb1P13405 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Rb1P13405 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.09■□□□□ 0.01
Rb1P13405 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Rb1P13405 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Rb1P13405 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Rb1P13405 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC15.09■□□□□ 0.01
Rb1P13405 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.09■□□□□ 0.01
Rb1P13405 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.09■□□□□ 0.01
Rb1P13405 Gpr146-202ENSMUST00000053120 1040 ntBASIC15.09■□□□□ 0.01
Rb1P13405 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Gm43509-201ENSMUST00000196551 2594 ntBASIC15.09■□□□□ 0.01
Rb1P13405 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Rb1P13405 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Rb1P13405 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0.01
Rb1P13405 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Rb1P13405 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Rb1P13405 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC15.08■□□□□ 0.01
Rb1P13405 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Rb1P13405 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.08■□□□□ 0
Rb1P13405 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rb1P13405 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.08■□□□□ 0
Rb1P13405 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.08■□□□□ 0
Rb1P13405 Gm11745-201ENSMUST00000121669 448 ntBASIC15.08■□□□□ 0
Rb1P13405 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.08■□□□□ 0
Rb1P13405 Gm18889-201ENSMUST00000174284 929 ntBASIC15.08■□□□□ 0
Rb1P13405 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Rb1P13405 Gm27321-201ENSMUST00000185021 205 ntBASIC15.08■□□□□ 0
Rb1P13405 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rb1P13405 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.08■□□□□ 0
Rb1P13405 Gm18246-201ENSMUST00000221023 728 ntBASIC15.08■□□□□ 0
Rb1P13405 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.08■□□□□ 0
Rb1P13405 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
Rb1P13405 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Rb1P13405 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Rb1P13405 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms