Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.05■□□□□ 0.32
Col1a1P11087 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col1a1P11087 Gm12957-201ENSMUST00000117835 377 ntBASIC17.05■□□□□ 0.32
Col1a1P11087 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col1a1P11087 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Col1a1P11087 Snora78-201ENSMUST00000158630 128 ntBASIC17.05■□□□□ 0.32
Col1a1P11087 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC17.05■□□□□ 0.32
Col1a1P11087 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col1a1P11087 Gm7067-201ENSMUST00000207698 1249 ntBASIC17.05■□□□□ 0.32
Col1a1P11087 AC110817.1-201ENSMUST00000225706 605 ntBASIC17.05■□□□□ 0.32
Col1a1P11087 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col1a1P11087 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Col1a1P11087 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Col1a1P11087 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.04■□□□□ 0.32
Col1a1P11087 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Col1a1P11087 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Col1a1P11087 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.04■□□□□ 0.32
Col1a1P11087 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.04■□□□□ 0.32
Col1a1P11087 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col1a1P11087 Gm6283-201ENSMUST00000182369 1000 ntBASIC17.04■□□□□ 0.32
Col1a1P11087 Gm7446-201ENSMUST00000221035 1240 ntBASIC17.04■□□□□ 0.32
Col1a1P11087 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col1a1P11087 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Col1a1P11087 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Col1a1P11087 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC17.04■□□□□ 0.32
Col1a1P11087 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Col1a1P11087 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Col1a1P11087 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Col1a1P11087 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col1a1P11087 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Col1a1P11087 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC17.03■□□□□ 0.32
Col1a1P11087 Gm5912-201ENSMUST00000122282 1438 ntBASIC17.03■□□□□ 0.32
Col1a1P11087 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Col1a1P11087 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Gm8835-201ENSMUST00000173096 1169 ntBASIC17.03■□□□□ 0.32
Col1a1P11087 Gm4804-201ENSMUST00000182234 999 ntBASIC17.03■□□□□ 0.32
Col1a1P11087 Gm21470-201ENSMUST00000187680 696 ntBASIC17.03■□□□□ 0.32
Col1a1P11087 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC17.03■□□□□ 0.32
Col1a1P11087 Gm17795-201ENSMUST00000214505 757 ntBASIC17.03■□□□□ 0.32
Col1a1P11087 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.03■□□□□ 0.32
Col1a1P11087 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC17.03■□□□□ 0.32
Col1a1P11087 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Col1a1P11087 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col1a1P11087 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Col1a1P11087 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
Col1a1P11087 Mup-ps23-201ENSMUST00000118063 630 ntBASIC17.02■□□□□ 0.32
Col1a1P11087 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Col1a1P11087 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Gm2495-201ENSMUST00000191160 466 ntBASIC17.02■□□□□ 0.32
Col1a1P11087 Gm45841-201ENSMUST00000207700 164 ntBASIC17.02■□□□□ 0.32
Col1a1P11087 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Rassf8-202ENSMUST00000058538 1131 ntBASIC17.02■□□□□ 0.32
Col1a1P11087 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col1a1P11087 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col1a1P11087 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col1a1P11087 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Col1a1P11087 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col1a1P11087 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col1a1P11087 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col1a1P11087 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Col1a1P11087 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col1a1P11087 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col1a1P11087 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col1a1P11087 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col1a1P11087 Gm8463-201ENSMUST00000208573 613 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms