Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Gm14494-201ENSMUST00000118786 435 ntBASIC12.65□□□□□ -0.38
H3f3cP02301 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.65□□□□□ -0.38
H3f3cP02301 Gm5264-201ENSMUST00000190584 848 ntBASIC12.65□□□□□ -0.38
H3f3cP02301 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H3f3cP02301 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H3f3cP02301 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
H3f3cP02301 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
H3f3cP02301 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.65□□□□□ -0.38
H3f3cP02301 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.65□□□□□ -0.38
H3f3cP02301 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
H3f3cP02301 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.39
H3f3cP02301 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
H3f3cP02301 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
H3f3cP02301 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
H3f3cP02301 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.64□□□□□ -0.39
H3f3cP02301 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.64□□□□□ -0.39
H3f3cP02301 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.64□□□□□ -0.39
H3f3cP02301 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
H3f3cP02301 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H3f3cP02301 Gm27301-201ENSMUST00000184012 127 ntBASIC12.64□□□□□ -0.39
H3f3cP02301 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.64□□□□□ -0.39
H3f3cP02301 Gm45747-201ENSMUST00000212203 999 ntBASIC12.64□□□□□ -0.39
H3f3cP02301 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Gm10175-201ENSMUST00000086013 645 ntBASIC12.64□□□□□ -0.39
H3f3cP02301 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.64□□□□□ -0.39
H3f3cP02301 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
H3f3cP02301 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
H3f3cP02301 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
H3f3cP02301 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
H3f3cP02301 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.63□□□□□ -0.39
H3f3cP02301 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.63□□□□□ -0.39
H3f3cP02301 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
H3f3cP02301 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
H3f3cP02301 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
H3f3cP02301 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.63□□□□□ -0.39
H3f3cP02301 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
H3f3cP02301 Gm16198-201ENSMUST00000118766 670 ntBASIC12.63□□□□□ -0.39
H3f3cP02301 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.63□□□□□ -0.39
H3f3cP02301 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.63□□□□□ -0.39
H3f3cP02301 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.63□□□□□ -0.39
H3f3cP02301 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.63□□□□□ -0.39
H3f3cP02301 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
H3f3cP02301 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms