Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Vti1aO89116 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vti1aO89116 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Vti1aO89116 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.88■□□□□ 0.13
Vti1aO89116 Gm25287-201ENSMUST00000103846 110 ntBASIC15.88■□□□□ 0.13
Vti1aO89116 Gm22918-201ENSMUST00000103855 110 ntBASIC15.88■□□□□ 0.13
Vti1aO89116 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.88■□□□□ 0.13
Vti1aO89116 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.88■□□□□ 0.13
Vti1aO89116 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.88■□□□□ 0.13
Vti1aO89116 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Vti1aO89116 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vti1aO89116 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Vti1aO89116 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Vti1aO89116 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Vti1aO89116 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.87■□□□□ 0.13
Vti1aO89116 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Gm38225-201ENSMUST00000194001 393 ntBASIC15.87■□□□□ 0.13
Vti1aO89116 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.87■□□□□ 0.13
Vti1aO89116 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Vti1aO89116 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Vti1aO89116 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.87■□□□□ 0.13
Vti1aO89116 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.86■□□□□ 0.13
Vti1aO89116 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Vti1aO89116 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Vti1aO89116 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.86■□□□□ 0.13
Vti1aO89116 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Vti1aO89116 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.86■□□□□ 0.13
Vti1aO89116 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.86■□□□□ 0.13
Vti1aO89116 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.86■□□□□ 0.13
Vti1aO89116 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Vti1aO89116 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Vti1aO89116 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
Vti1aO89116 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vti1aO89116 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Vti1aO89116 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vti1aO89116 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Vti1aO89116 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Vti1aO89116 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vti1aO89116 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vti1aO89116 Gm16026-204ENSMUST00000162652 683 ntBASIC15.85■□□□□ 0.13
Vti1aO89116 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Vti1aO89116 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Vti1aO89116 Gm18737-201ENSMUST00000173594 937 ntBASIC15.85■□□□□ 0.13
Vti1aO89116 Mir6977-201ENSMUST00000184960 64 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms