Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Vti1bO88384 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Gm5682-201ENSMUST00000173402 505 ntBASIC14.06□□□□□ -0.16
Vti1bO88384 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
Vti1bO88384 Gm44487-201ENSMUST00000205145 325 ntBASIC14.06□□□□□ -0.16
Vti1bO88384 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Vti1bO88384 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.06□□□□□ -0.16
Vti1bO88384 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.06□□□□□ -0.16
Vti1bO88384 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Vti1bO88384 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Vti1bO88384 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.06□□□□□ -0.16
Vti1bO88384 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vti1bO88384 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vti1bO88384 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.05□□□□□ -0.16
Vti1bO88384 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.05□□□□□ -0.16
Vti1bO88384 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.05□□□□□ -0.16
Vti1bO88384 AV026068-213ENSMUST00000223675 1171 ntBASIC14.05□□□□□ -0.16
Vti1bO88384 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.05□□□□□ -0.16
Vti1bO88384 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vti1bO88384 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.05□□□□□ -0.16
Vti1bO88384 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vti1bO88384 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vti1bO88384 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Vti1bO88384 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.04□□□□□ -0.16
Vti1bO88384 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Gm11764-201ENSMUST00000120221 623 ntBASIC14.04□□□□□ -0.16
Vti1bO88384 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.04□□□□□ -0.16
Vti1bO88384 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.04□□□□□ -0.16
Vti1bO88384 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Vti1bO88384 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.04□□□□□ -0.16
Vti1bO88384 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.04□□□□□ -0.16
Vti1bO88384 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vti1bO88384 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.03□□□□□ -0.16
Vti1bO88384 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vti1bO88384 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms