Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cfdp1O88271 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Cfdp1O88271 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cfdp1O88271 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cfdp1O88271 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC18.35■□□□□ 0.53
Cfdp1O88271 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC18.35■□□□□ 0.53
Cfdp1O88271 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.35■□□□□ 0.53
Cfdp1O88271 Gm22175-201ENSMUST00000175007 78 ntBASIC18.35■□□□□ 0.53
Cfdp1O88271 Gm44872-201ENSMUST00000207864 420 ntBASIC18.35■□□□□ 0.53
Cfdp1O88271 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cfdp1O88271 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Cfdp1O88271 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm13015-201ENSMUST00000118674 204 ntBASIC18.34■□□□□ 0.53
Cfdp1O88271 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm9824-201ENSMUST00000178707 561 ntBASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm4691-201ENSMUST00000182339 1000 ntBASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm2451-201ENSMUST00000199447 999 ntBASIC18.34■□□□□ 0.53
Cfdp1O88271 Gm10290-201ENSMUST00000200451 999 ntBASIC18.34■□□□□ 0.53
Cfdp1O88271 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.34■□□□□ 0.53
Cfdp1O88271 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.34■□□□□ 0.53
Cfdp1O88271 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Cfdp1O88271 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cfdp1O88271 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cfdp1O88271 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfdp1O88271 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfdp1O88271 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfdp1O88271 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cfdp1O88271 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cfdp1O88271 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cfdp1O88271 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC18.33■□□□□ 0.52
Cfdp1O88271 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC18.33■□□□□ 0.52
Cfdp1O88271 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfdp1O88271 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfdp1O88271 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.33■□□□□ 0.52
Cfdp1O88271 AC158529.1-201ENSMUST00000223618 239 ntBASIC18.33■□□□□ 0.52
Cfdp1O88271 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.33■□□□□ 0.52
Cfdp1O88271 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfdp1O88271 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.52
Cfdp1O88271 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfdp1O88271 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC18.33■□□□□ 0.52
Cfdp1O88271 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cfdp1O88271 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cfdp1O88271 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cfdp1O88271 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cfdp1O88271 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cfdp1O88271 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cfdp1O88271 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.32■□□□□ 0.52
Cfdp1O88271 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.32■□□□□ 0.52
Cfdp1O88271 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC18.32■□□□□ 0.52
Cfdp1O88271 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Cfdp1O88271 Gm9726-201ENSMUST00000180321 678 ntBASIC18.32■□□□□ 0.52
Cfdp1O88271 Gm8116-201ENSMUST00000182917 1201 ntBASIC18.32■□□□□ 0.52
Cfdp1O88271 Gm27430-201ENSMUST00000184585 107 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms