Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Cbx4O55187 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cbx4O55187 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cbx4O55187 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cbx4O55187 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Cbx4O55187 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Cbx4O55187 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cbx4O55187 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Cbx4O55187 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Cbx4O55187 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.41□□□□□ -0.1
Cbx4O55187 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Cbx4O55187 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Gm9727-201ENSMUST00000161387 555 ntBASIC14.41□□□□□ -0.1
Cbx4O55187 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cbx4O55187 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.41□□□□□ -0.1
Cbx4O55187 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.41□□□□□ -0.1
Cbx4O55187 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Cbx4O55187 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Cbx4O55187 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Cbx4O55187 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.41□□□□□ -0.1
Cbx4O55187 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Cbx4O55187 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Cbx4O55187 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cbx4O55187 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Cbx4O55187 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.4□□□□□ -0.1
Cbx4O55187 Gm11779-201ENSMUST00000118541 368 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 Gm16026-204ENSMUST00000162652 683 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC14.4□□□□□ -0.1
Cbx4O55187 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.4□□□□□ -0.1
Cbx4O55187 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.4□□□□□ -0.1
Cbx4O55187 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.4□□□□□ -0.1
Cbx4O55187 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Cbx4O55187 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Cbx4O55187 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.4□□□□□ -0.1
Cbx4O55187 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.4□□□□□ -0.1
Cbx4O55187 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.4□□□□□ -0.1
Cbx4O55187 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Cbx4O55187 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Cbx4O55187 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx4O55187 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cbx4O55187 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms