Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC11.62□□□□□ -0.55
Pde6dO55057 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC11.62□□□□□ -0.55
Pde6dO55057 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.62□□□□□ -0.55
Pde6dO55057 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.62□□□□□ -0.55
Pde6dO55057 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pde6dO55057 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pde6dO55057 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pde6dO55057 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pde6dO55057 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pde6dO55057 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Pde6dO55057 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Pde6dO55057 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.61□□□□□ -0.55
Pde6dO55057 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.61□□□□□ -0.55
Pde6dO55057 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.61□□□□□ -0.55
Pde6dO55057 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.61□□□□□ -0.55
Pde6dO55057 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.61□□□□□ -0.55
Pde6dO55057 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.61□□□□□ -0.55
Pde6dO55057 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Pde6dO55057 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Pde6dO55057 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm45293-201ENSMUST00000209754 1812 ntBASIC11.6□□□□□ -0.55
Pde6dO55057 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.6□□□□□ -0.55
Pde6dO55057 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.6□□□□□ -0.55
Pde6dO55057 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.6□□□□□ -0.55
Pde6dO55057 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.6□□□□□ -0.55
Pde6dO55057 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pde6dO55057 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.6□□□□□ -0.55
Pde6dO55057 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pde6dO55057 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms