Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Gm15823-201ENSMUST00000064305 670 ntBASIC16.15■□□□□ 0.18
Trdmt1O55055 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.15■□□□□ 0.18
Trdmt1O55055 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdmt1O55055 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 Gm28760-201ENSMUST00000185995 736 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Gm45384-201ENSMUST00000210451 277 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 Gm9908-201ENSMUST00000211534 448 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trdmt1O55055 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.14■□□□□ 0.17
Trdmt1O55055 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdmt1O55055 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Gm12091-201ENSMUST00000146791 830 ntBASIC16.13■□□□□ 0.17
Trdmt1O55055 Gm37917-201ENSMUST00000194711 392 ntBASIC16.13■□□□□ 0.17
Trdmt1O55055 Gm43433-201ENSMUST00000196573 481 ntBASIC16.13■□□□□ 0.17
Trdmt1O55055 Gm6916-202ENSMUST00000205523 195 ntBASIC16.13■□□□□ 0.17
Trdmt1O55055 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.13■□□□□ 0.17
Trdmt1O55055 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
Trdmt1O55055 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdmt1O55055 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Gm31326-201ENSMUST00000191856 1048 ntBASIC16.12■□□□□ 0.17
Trdmt1O55055 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trdmt1O55055 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Trdmt1O55055 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
Trdmt1O55055 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms