Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15□□□□□ -0.01
Banf1O54962 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Banf1O54962 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Banf1O54962 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Gm6550-201ENSMUST00000187574 993 ntBASIC15□□□□□ -0.01
Banf1O54962 Gm10459-201ENSMUST00000202708 1155 ntBASIC15□□□□□ -0.01
Banf1O54962 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15□□□□□ -0.01
Banf1O54962 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15□□□□□ -0.01
Banf1O54962 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC15□□□□□ -0.01
Banf1O54962 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.99□□□□□ -0.01
Banf1O54962 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Banf1O54962 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Banf1O54962 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Banf1O54962 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Gm7230-201ENSMUST00000173026 815 ntBASIC14.99□□□□□ -0.01
Banf1O54962 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Banf1O54962 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Banf1O54962 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Banf1O54962 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.99□□□□□ -0.01
Banf1O54962 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Banf1O54962 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Banf1O54962 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
Banf1O54962 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.98□□□□□ -0.01
Banf1O54962 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Banf1O54962 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Banf1O54962 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Gm11452-201ENSMUST00000122376 690 ntBASIC14.98□□□□□ -0.01
Banf1O54962 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.98□□□□□ -0.01
Banf1O54962 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.98□□□□□ -0.01
Banf1O54962 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.98□□□□□ -0.01
Banf1O54962 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Banf1O54962 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Banf1O54962 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.97□□□□□ -0.01
Banf1O54962 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Banf1O54962 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Banf1O54962 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.97□□□□□ -0.01
Banf1O54962 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.97□□□□□ -0.01
Banf1O54962 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.97□□□□□ -0.01
Banf1O54962 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Banf1O54962 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms