Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Smarce1O54941 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.52■□□□□ 0.4
Smarce1O54941 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Gm6550-201ENSMUST00000187574 993 ntBASIC17.52■□□□□ 0.4
Smarce1O54941 Gm34391-201ENSMUST00000203706 907 ntBASIC17.52■□□□□ 0.4
Smarce1O54941 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.52■□□□□ 0.4
Smarce1O54941 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smarce1O54941 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smarce1O54941 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarce1O54941 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Smarce1O54941 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarce1O54941 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarce1O54941 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smarce1O54941 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Smarce1O54941 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smarce1O54941 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Smarce1O54941 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC17.51■□□□□ 0.39
Smarce1O54941 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smarce1O54941 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.51■□□□□ 0.39
Smarce1O54941 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.51■□□□□ 0.39
Smarce1O54941 Gm15173-201ENSMUST00000122049 433 ntBASIC17.51■□□□□ 0.39
Smarce1O54941 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smarce1O54941 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Smarce1O54941 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Smarce1O54941 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Smarce1O54941 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.5■□□□□ 0.39
Smarce1O54941 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Smarce1O54941 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC17.5■□□□□ 0.39
Smarce1O54941 Gm45167-201ENSMUST00000208007 322 ntBASIC17.5■□□□□ 0.39
Smarce1O54941 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC17.5■□□□□ 0.39
Smarce1O54941 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smarce1O54941 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
Smarce1O54941 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smarce1O54941 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC17.49■□□□□ 0.39
Smarce1O54941 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms