Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Dkk1O54908 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.24□□□□□ -0.29
Dkk1O54908 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Gm12350-201ENSMUST00000121208 462 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.24□□□□□ -0.29
Dkk1O54908 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Gm18489-201ENSMUST00000172565 551 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Mir5131-201ENSMUST00000175426 93 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Mir5126-201ENSMUST00000175513 77 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Gm8318-201ENSMUST00000182954 872 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Gm3489-201ENSMUST00000190083 528 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Mzt1-203ENSMUST00000227948 952 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Lyrm1-201ENSMUST00000054440 752 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Vmn1r223-201ENSMUST00000091719 1086 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Dkk1O54908 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.24□□□□□ -0.29
Dkk1O54908 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.24□□□□□ -0.29
Dkk1O54908 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Dkk1O54908 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.24□□□□□ -0.29
Dkk1O54908 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Dkk1O54908 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Dkk1O54908 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Dkk1O54908 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.23□□□□□ -0.29
Dkk1O54908 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.23□□□□□ -0.29
Dkk1O54908 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Dkk1O54908 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Dkk1O54908 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Dkk1O54908 Gm33571-201ENSMUST00000193271 657 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC13.23□□□□□ -0.29
Dkk1O54908 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.23□□□□□ -0.29
Dkk1O54908 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 CT009728.1-201ENSMUST00000225228 1050 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 CT010505.1-201ENSMUST00000227026 396 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Dkk1O54908 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.23□□□□□ -0.29
Dkk1O54908 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.23□□□□□ -0.29
Dkk1O54908 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Dkk1O54908 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Gm37370-201ENSMUST00000191996 1410 ntBASIC13.22□□□□□ -0.29
Dkk1O54908 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.22□□□□□ -0.29
Dkk1O54908 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Dkk1O54908 Gm42905-201ENSMUST00000196237 1611 ntBASIC13.22□□□□□ -0.29
Dkk1O54908 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms