Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
DffbO54788 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
DffbO54788 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
DffbO54788 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
DffbO54788 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
DffbO54788 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.67□□□□□ -0.38
DffbO54788 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
DffbO54788 Gm43767-201ENSMUST00000198933 381 ntBASIC12.67□□□□□ -0.38
DffbO54788 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.67□□□□□ -0.38
DffbO54788 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Mxra8os-201ENSMUST00000097740 687 ntBASIC12.67□□□□□ -0.38
DffbO54788 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.67□□□□□ -0.38
DffbO54788 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
DffbO54788 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DffbO54788 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.66□□□□□ -0.38
DffbO54788 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
DffbO54788 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
DffbO54788 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Gm12008-201ENSMUST00000117791 755 ntBASIC12.66□□□□□ -0.38
DffbO54788 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.66□□□□□ -0.38
DffbO54788 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Gm17807-201ENSMUST00000186869 298 ntBASIC12.66□□□□□ -0.38
DffbO54788 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.66□□□□□ -0.38
DffbO54788 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
DffbO54788 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DffbO54788 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.66□□□□□ -0.38
DffbO54788 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DffbO54788 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.65□□□□□ -0.38
DffbO54788 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
DffbO54788 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
DffbO54788 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC12.65□□□□□ -0.38
DffbO54788 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DffbO54788 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
DffbO54788 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms