Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.35□□□□□ -0.43
Ccr6O54689 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccr6O54689 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC12.35□□□□□ -0.43
Ccr6O54689 AC122024.2-201ENSMUST00000220086 871 ntBASIC12.35□□□□□ -0.43
Ccr6O54689 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
Ccr6O54689 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Ccr6O54689 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ccr6O54689 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Ccr6O54689 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Ccr6O54689 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccr6O54689 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Ccr6O54689 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.34□□□□□ -0.43
Ccr6O54689 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Ccr6O54689 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.34□□□□□ -0.43
Ccr6O54689 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.34□□□□□ -0.43
Ccr6O54689 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.34□□□□□ -0.43
Ccr6O54689 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.34□□□□□ -0.43
Ccr6O54689 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Ccr6O54689 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Ccr6O54689 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Ccr6O54689 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Ccr6O54689 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Ccr6O54689 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Ccr6O54689 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Ccr6O54689 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccr6O54689 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccr6O54689 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.33□□□□□ -0.44
Ccr6O54689 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC12.33□□□□□ -0.44
Ccr6O54689 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.33□□□□□ -0.44
Ccr6O54689 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ccr6O54689 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.33□□□□□ -0.44
Ccr6O54689 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Ccr6O54689 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC12.33□□□□□ -0.44
Ccr6O54689 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Ccr6O54689 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Ccr6O54689 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms