Protein–RNA interactions for Protein: O35973

Per1, Period circadian protein homolog 1, mousemouse

Predictions only

Length 1,291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per1O35973 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.93■□□□□ 0.14
Per1O35973 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Per1O35973 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Per1O35973 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Per1O35973 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC15.93■□□□□ 0.14
Per1O35973 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Gm13223-201ENSMUST00000118609 747 ntBASIC15.93■□□□□ 0.14
Per1O35973 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Per1O35973 Gm27631-201ENSMUST00000184163 466 ntBASIC15.93■□□□□ 0.14
Per1O35973 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Per1O35973 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Per1O35973 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Per1O35973 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.93■□□□□ 0.14
Per1O35973 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.93■□□□□ 0.14
Per1O35973 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.93■□□□□ 0.14
Per1O35973 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Per1O35973 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Per1O35973 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Per1O35973 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.92■□□□□ 0.14
Per1O35973 Gm12428-201ENSMUST00000119844 727 ntBASIC15.92■□□□□ 0.14
Per1O35973 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.92■□□□□ 0.14
Per1O35973 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Per1O35973 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Per1O35973 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Per1O35973 Gm6222-201ENSMUST00000120787 396 ntBASIC15.91■□□□□ 0.14
Per1O35973 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.91■□□□□ 0.14
Per1O35973 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.91■□□□□ 0.14
Per1O35973 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.91■□□□□ 0.14
Per1O35973 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.91■□□□□ 0.14
Per1O35973 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.91■□□□□ 0.14
Per1O35973 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Per1O35973 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Per1O35973 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Per1O35973 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.9■□□□□ 0.14
Per1O35973 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Per1O35973 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Per1O35973 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Gm24543-201ENSMUST00000103867 82 ntBASIC15.9■□□□□ 0.14
Per1O35973 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.9■□□□□ 0.14
Per1O35973 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Per1O35973 Gm38294-201ENSMUST00000192831 381 ntBASIC15.9■□□□□ 0.14
Per1O35973 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.9■□□□□ 0.14
Per1O35973 Gm16476-201ENSMUST00000221544 139 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms