Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Cx3cl1O35188 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.84□□□□□ -0.19
Cx3cl1O35188 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.84□□□□□ -0.19
Cx3cl1O35188 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cx3cl1O35188 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cl1O35188 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cl1O35188 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cl1O35188 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cl1O35188 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Cx3cl1O35188 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cx3cl1O35188 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm14822-201ENSMUST00000122247 291 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm27702-201ENSMUST00000184512 56 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm20553-201ENSMUST00000204205 844 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm45612-201ENSMUST00000211320 160 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.83□□□□□ -0.2
Cx3cl1O35188 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cx3cl1O35188 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.82□□□□□ -0.2
Cx3cl1O35188 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.82□□□□□ -0.2
Cx3cl1O35188 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cx3cl1O35188 Gm11025-201ENSMUST00000140773 466 ntBASIC13.82□□□□□ -0.2
Cx3cl1O35188 Gm6736-201ENSMUST00000166583 948 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms