Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.53■□□□□ 0.4
Hdac1O09106 Gm5366-201ENSMUST00000215494 1338 ntBASIC17.53■□□□□ 0.4
Hdac1O09106 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC17.53■□□□□ 0.4
Hdac1O09106 Gm34391-201ENSMUST00000203706 907 ntBASIC17.53■□□□□ 0.4
Hdac1O09106 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hdac1O09106 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
Hdac1O09106 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hdac1O09106 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC17.52■□□□□ 0.4
Hdac1O09106 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Hdac1O09106 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.52■□□□□ 0.4
Hdac1O09106 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Birc2-201ENSMUST00000054878 378 ntBASIC17.52■□□□□ 0.4
Hdac1O09106 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hdac1O09106 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hdac1O09106 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac1O09106 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hdac1O09106 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac1O09106 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Hdac1O09106 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac1O09106 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac1O09106 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hdac1O09106 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac1O09106 Gm7230-201ENSMUST00000173026 815 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac1O09106 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Gm28033-201ENSMUST00000184224 96 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Ank2-226ENSMUST00000189368 339 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.51■□□□□ 0.39
Hdac1O09106 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Olfr286-202ENSMUST00000205305 969 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Hdac1O09106 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.51■□□□□ 0.39
Hdac1O09106 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac1O09106 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac1O09106 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.51■□□□□ 0.39
Hdac1O09106 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Hdac1O09106 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hdac1O09106 AC131743.5-201ENSMUST00000220775 1618 ntBASIC17.5■□□□□ 0.39
Hdac1O09106 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac1O09106 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hdac1O09106 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Hdac1O09106 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac1O09106 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC17.5■□□□□ 0.39
Hdac1O09106 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hdac1O09106 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms