Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shisa8J3QNX5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Gm8097-201ENSMUST00000117903 829 ntBASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.46□□□□□ -0.25
Shisa8J3QNX5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Gm8655-201ENSMUST00000221159 852 ntBASIC13.46□□□□□ -0.25
Shisa8J3QNX5 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Shisa8J3QNX5 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.46□□□□□ -0.26
Shisa8J3QNX5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC13.45□□□□□ -0.26
Shisa8J3QNX5 AA414768-201ENSMUST00000121924 1257 ntBASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Gm43767-201ENSMUST00000198933 381 ntBASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.45□□□□□ -0.26
Shisa8J3QNX5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Shisa8J3QNX5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Cmtm5-203ENSMUST00000227441 610 ntBASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Shisa8J3QNX5 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Shisa8J3QNX5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms