Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Colca2F8VPY8 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Colca2F8VPY8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Colca2F8VPY8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Colca2F8VPY8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Colca2F8VPY8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Gm15957-201ENSMUST00000118893 974 ntBASIC13.82□□□□□ -0.2
Colca2F8VPY8 Gm14660-201ENSMUST00000119809 575 ntBASIC13.82□□□□□ -0.2
Colca2F8VPY8 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Gm17420-201ENSMUST00000164753 153 ntBASIC13.82□□□□□ -0.2
Colca2F8VPY8 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.82□□□□□ -0.2
Colca2F8VPY8 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.82□□□□□ -0.2
Colca2F8VPY8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Colca2F8VPY8 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Gm15240-201ENSMUST00000118156 720 ntBASIC13.81□□□□□ -0.2
Colca2F8VPY8 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Colca2F8VPY8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.8□□□□□ -0.2
Colca2F8VPY8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.8□□□□□ -0.2
Colca2F8VPY8 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Gm7287-201ENSMUST00000205267 602 ntBASIC13.8□□□□□ -0.2
Colca2F8VPY8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Colca2F8VPY8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.8□□□□□ -0.2
Colca2F8VPY8 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Colca2F8VPY8 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms