Protein–RNA interactions for Protein: E9PUB3

Gm5878, Predicted gene 5878, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5878E9PUB3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Gm5878E9PUB3 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Rad51c-202ENSMUST00000067692 3944 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm9103-201ENSMUST00000119371 405 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm13464-201ENSMUST00000119418 935 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm4899-201ENSMUST00000178708 719 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm21362-201ENSMUST00000194272 928 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 AC122881.1-201ENSMUST00000225757 2695 ntBASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Gm5878E9PUB3 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.09□□□□□ -0.63
Gm5878E9PUB3 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms