Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Gm3543D3Z235 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Gm3543D3Z235 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Gm17968-201ENSMUST00000194902 784 ntBASIC13.33□□□□□ -0.28
Gm3543D3Z235 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Gm3543D3Z235 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm15427-201ENSMUST00000117288 531 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 Mir1895-201ENSMUST00000122615 79 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm11025-201ENSMUST00000140773 466 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm45747-201ENSMUST00000212203 999 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.32□□□□□ -0.28
Gm3543D3Z235 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Gm3543D3Z235 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.31□□□□□ -0.28
Gm3543D3Z235 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Gm3543D3Z235 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms