Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Lnp1A0A1B0GSK3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm5177-201ENSMUST00000183092 997 ntBASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm44771-201ENSMUST00000206975 626 ntBASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Lnp1A0A1B0GSK3 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm16198-201ENSMUST00000118766 670 ntBASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm12260-201ENSMUST00000122447 411 ntBASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm18206-201ENSMUST00000207027 926 ntBASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 AW822252-206ENSMUST00000208904 237 ntBASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Lnp1A0A1B0GSK3 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms