Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm9856-201ENSMUST00000217077 2578 ntBASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm13836-201ENSMUST00000121159 501 ntBASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm10499-201ENSMUST00000174094 934 ntBASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm12644-201ENSMUST00000119935 606 ntBASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav13d-4A0A0G2JFX3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms