Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Rubie-203ENSMUST00000227803 2430 ntBASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Trbv3A0A0A6YYE2 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trbv3A0A0A6YYE2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trbv3A0A0A6YYE2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trbv3A0A0A6YYE2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm6623-201ENSMUST00000173570 544 ntBASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.33□□□□□ -0.6
Trbv3A0A0A6YYE2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Ksr1-207ENSMUST00000226282 5260 ntBASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.32□□□□□ -0.6
Trbv3A0A0A6YYE2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms