Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC11.02□□□□□ -0.64
Trav6n-6A0A075B6B2 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm7153-201ENSMUST00000117092 455 ntBASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Trav6n-6A0A075B6B2 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm12497-201ENSMUST00000138778 237 ntBASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm25745-201ENSMUST00000174945 133 ntBASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Trav6n-6A0A075B6B2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Trav6n-6A0A075B6B2 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms