Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm5867-201ENSMUST00000063197 592 ntBASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Trav6d-7A0A075B6B0 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm13036-201ENSMUST00000117799 748 ntBASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm12260-201ENSMUST00000122447 411 ntBASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm5712-201ENSMUST00000199748 1043 ntBASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Psmb5-202ENSMUST00000227257 622 ntBASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Trav6d-7A0A075B6B0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.4□□□□□ -0.59
Trav6d-7A0A075B6B0 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm19164-201ENSMUST00000210667 640 ntBASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Trav6d-7A0A075B6B0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms