Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Gm24589-201ENSMUST00000116692 94 ntBASIC12.09□□□□□ -0.47
Trav18A0A075B656 Gm9103-201ENSMUST00000119371 405 ntBASIC12.09□□□□□ -0.47
Trav18A0A075B656 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav18A0A075B656 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.09□□□□□ -0.47
Trav18A0A075B656 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav18A0A075B656 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Gm45167-201ENSMUST00000208007 322 ntBASIC12.08□□□□□ -0.48
Trav18A0A075B656 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav18A0A075B656 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Best4-ps-201ENSMUST00000129783 1380 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gm7230-201ENSMUST00000173026 815 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gm6550-201ENSMUST00000187574 993 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gm18246-201ENSMUST00000221023 728 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Rps4l-201ENSMUST00000071745 943 ntBASIC12.07□□□□□ -0.48
Trav18A0A075B656 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Trav18A0A075B656 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms