Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav8-1A0A075B641 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC10.58□□□□□ -0.71
Trav8-1A0A075B641 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gm21814-202ENSMUST00000203277 873 ntBASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 AC135963.1-201ENSMUST00000211640 717 ntBASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Spsb2-203ENSMUST00000112473 1322 ntBASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
Trav8-1A0A075B641 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm9889-202ENSMUST00000206983 1577 ntBASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm16061-201ENSMUST00000122167 857 ntBASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm2274-201ENSMUST00000184539 609 ntBASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm8520-201ENSMUST00000186517 868 ntBASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Gm7370-201ENSMUST00000219471 767 ntBASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav8-1A0A075B641 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms