Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm27646-201ENSMUST00000183989 110 ntBASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm6296-201ENSMUST00000222599 943 ntBASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm12644-201ENSMUST00000119935 606 ntBASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav15d-1-dv6d-1A0A075B624 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms