Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav7n-4A0A075B620 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Gm13168-201ENSMUST00000121771 632 ntBASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Gm8520-201ENSMUST00000186517 868 ntBASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav7n-4A0A075B620 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav7n-4A0A075B620 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.15□□□□□ -0.63
Trav7n-4A0A075B620 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav7n-4A0A075B620 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Trav7n-4A0A075B620 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.15□□□□□ -0.63
Trav7n-4A0A075B620 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Grk6-207ENSMUST00000225925 2769 ntBASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Gm27011-201ENSMUST00000182352 972 ntBASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Gm18244-201ENSMUST00000219747 1566 ntBASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav7n-4A0A075B620 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm27389-201ENSMUST00000183622 195 ntBASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 AC125350.1-201ENSMUST00000225115 903 ntBASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav7n-4A0A075B620 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms