Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm15039-201ENSMUST00000118914 875 ntBASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 AC130713.1-201ENSMUST00000228853 1096 ntBASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm21009-201ENSMUST00000197169 1669 ntBASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav16d-dv11A0A075B617 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trav16d-dv11A0A075B617 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.67
Trav16d-dv11A0A075B617 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm42471-201ENSMUST00000201457 1865 ntBASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm11355-201ENSMUST00000121120 306 ntBASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Arhgef33-211ENSMUST00000225658 473 ntBASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trav16d-dv11A0A075B617 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm27011-201ENSMUST00000182352 972 ntBASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm42829-201ENSMUST00000198417 2585 ntBASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Trav16d-dv11A0A075B617 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms